Association between Catechol-O-Methyltransferase (COMT) gene rs4680 SNP and rs165599 SNP and schizophrenia: A meta-analysis of case-control studies

Research Article
Open access

Association between Catechol-O-Methyltransferase (COMT) gene rs4680 SNP and rs165599 SNP and schizophrenia: A meta-analysis of case-control studies

Zibo Li 1*
  • 1 Fujian Agriculture and Forestry University    
  • *corresponding author lzb549462@163.com
Published on 6 December 2024 | https://doi.org/10.54254/2753-8818/2024.17990
TNS Vol.64
ISSN (Print): 2753-8826
ISSN (Online): 2753-8818
ISBN (Print): 978-1-83558-731-7
ISBN (Online): 978-1-83558-732-4

Abstract

The relationship between schizophrenia and single-nucleotide polymorphisms (SNPs) in the Catechol-O-MethylTransferase (COMT) gene has been investigated in numerous research, yielding varying conclusions. The investigation aimed to perform a meta-analysis for the purpose of determining the combined impact measure of the association of the COMT gene rs165599 SNP and ra4680 SNP with schizophrenia. The effect size used to assess the relationship between these two SNPs and schizophrenia was the odds ratio (OR). R studio was used to achieve the pooled ORs. Additionally, for the sake of assessing bias of publications, this paper utilize the Egger's test. Meta-analyses involving 19 independent studies have not revealed a statistically significant association between rs4680 and rs165599 SNPs and schizophrenia; however, the A versus A genetic model regarding rs4680 SNP has demonstrated a positive association with schizophrenia (OR=0.86,95% CI = 0.75-0.99, I²= 42%,P= 0.04), which is dependent on two studies. According to this study, there may be no association between the COMT gene rs16599 SNP and rs4680 SNP and the risk of schizophrenia or its psychopathological symptoms.

Keywords:

COMT, meta‐analysis, odds ratio, schizophrenia, SNP

Li,Z. (2024). Association between Catechol-O-Methyltransferase (COMT) gene rs4680 SNP and rs165599 SNP and schizophrenia: A meta-analysis of case-control studies. Theoretical and Natural Science,64,170-176.
Export citation

1. Introduction

A severe mental illness characterized by growing functional impairment and recurring psychotic relapses is schizophrenia. It is the outcome of an unclear gene-environment interaction. In schizophrenia, the gene encoding catechol-O-methyltransferase (COMT) is probably involved. Its rs165599 (A/G) polymorphism has been linked to changes in the expression of the COMT gene. Additionally, the human COMT gene, which spans approximately 35 kb on chromosome 22q11.2, may result in reduced dopamine levels as well as more effective dopamine degradation [1]. Due to its functional significance, the COMT Val158/108Met (rs4680) polymorphism represents the gene variation that has been researched the most in the field of psychiatry. Studies on linkage and association suggested a connection between this locus and schizophrenia [2,3]. Apart from these deficiencies, individuals with VCFS also show a higher frequency of mental and behavioral issues, such as schizophrenia. The prevalence of schizophrenia in VCFS patients is approximately 24%, while it is only 1% in the general population [4]. Owing to its position on the genome and its role in dopamine catabolism, COMT is considered a promising prospect gene for schizophrenia [5].

With the increasing of independent studies of the association of schizophrenia and the COMT, the results of these studies vary, which may cause confusion. For example, due to the different area of populations, the result may be opposite. Additionally, the small sample size was insufficient to mitigate its impact.

A technique for synthesizing the findings of several separate research done on a related subject is called meta-analysis. For the most extensively researched single-nucleotide polymorphism (SNP), rs4680, numerous meta-analyses have been carried out and updated [6-11]. A further SNP that is frequently researched is rs165599. Furthermore, rs4680 is also commonly researched. With the help of suitable meta-analytical techniques, we updated the pooled effect size calculation in this study by looking at the association of schizophrenia and the single-nucleotide polymorphisms rs165599 and rs4680 specifically in case-control research.

2. Methodology

2.1. Literature Review

To find papers from April 2024 on databases like Web of Science, PubMed, and so on, this paper uses Search terms for schizophrenia, COMT. We also looked through the key papers' references to locate further relevant research. When the data needed to be more precise, we made an attempt to get in touch with the authors directly. To find further pertinent research, we also looked through the reference lists of the publications that we had already identified and the most recent literature reviews. Figure 1 presents a detailed flow chart outlining the selection procedure used.

/word/media/image1.png

Figure 1. Diagram outlining the study selection procedure for inclusion in the meta-analysis

2.2. Inclusion And Exclusion Criteria

The studies included in meta-analysis examined the relationship between COMT SNPs and schizophrenia, using healthy people as controls in case-control research. They also ensured that the control population’s genotype distribution followed Hardy-Weinberg equilibrium (HWE). All studies used DSM-IV diagnostic criteria for diagnosis. Studies published in languages other than English were excluded.

2.3. Meta-analysis

The odds ratio (OR) is a commonly used risk statistic in retrospective case-control studies. Retrospective analysis helps determine the level of exposure to the assumed risk factor [12]. An OR can be any non-negative number. Interpretation of the OR: for the desired result, exposure to the factor is not risky if OR = 1, risky if OR > 1, and risky if OR < 1 [13]. The odds was used to measure the correlation of allele distribution and schizophrenia. For the meta-analysis, the studies utilized three different genetic models—A versus A, A versus G, and G versus G. The pooled ORs were tested for significance using a z test, while Egger's test was applied to examine publication bias . Furthermore, because of the substantial heterogeneity among the studies in the meta-analyses, eight studies of rs16599 SNP and eighteen studies of rs4680 SNP were employed in the subgroup analyses. The studies conduct their analysis in R studio (version 1.6.0), applying a significance threshold of 0.05.

3. Results

3.1. Study Features

After conducting an extensive search through the internet database, we first discovered 2252 citations. After 395 duplicates were electronically eliminated, 1857 citations remained. After removing 1413 papers because their titles and abstracts did not match the qualifying requirements, we additionally eliminated 93 articles because they were reviews, which are not suitable for publication. Then, we eliminated 313 citations since they exclusively discussed schizophrenia and the COMT and had distinct goals. Nineteen studies were eliminated due to various reasons, such as inconsistencies in the method or SNPs, and insufficient data. Lastly, there were nineteen citations. In Figure 1, a PRISMA flowchart was presented. We created a total of 7053 cases and 8944 controls in 19 investigations. Furthermore, from 1998 to 2015, all of these research were case-control studies. Furthermore, a wide range of locations were chosen. Table 1 presents the attributes of the 19 studies that were chosen and subsequently included.

Table 1. Features of the studies incorporated into the meta‐analysis

author

year

country

sample size

SNPs

Diagnostic System

case

control

cordeiro et al.

2012

Brazilian

245

834

rs165599

DSM-Ⅳ

voisey et al.

2012

Australia

201

266

rs4680

DSM-Ⅳ

Nonukawa et al.

2007

Japan

399

440

rs4680

DSM-Ⅳ

398

440

rs165599

DSM-Ⅳ

Ho Jin Kang et al.

2010

Korea

348

360

rs165599

DSM-Ⅳ

348

360

rs4680

DSM-Ⅳ

Tovilla-Zarate et al.

2013

Mexico

186

222

rs4680

DSM-Ⅳ

Galderisi et al.

2005

Italy

106

111

rs4680

DSM-Ⅳ

Lee,S.G. et al.

2005

Korea

320

379

rs4680

DSM-Ⅳ

Huang,C.C et al.

2012

China

434

442

rs165599

DSM-Ⅳ

434

442

rs4680

DSM-Ⅳ

Lajin et al.

2011

Syria

71

102

rs4680

DSM-Ⅳ

Oomori,O. et al.

1998

Japan

150

150

rs4680

DSM-Ⅳ

Acar,Ceren et al.

2015

Turkey

96

100

rs165599

DSM-Ⅳ

96

100

rs4680

DSM-Ⅳ

AI-Asmary,S et al.

2014

Saudi Arabia

172

177

rs4680

DSM-Ⅳ

Maria,Ktrotsou et al.

2012

Greece

108

97

rs165599

DSM-Ⅳ

108

97

rs4680

DSM-Ⅳ

Altinyazar,Vesile et al.

2015

Turkey

181

368

rs165599

DSM-Ⅳ

181

368

rs4680

DSM-Ⅳ

Zhang,Fuquan et al.

2012

China

768

1348

rs165599

DSM-Ⅳ

963

992

rs4680

DSM-Ⅳ

Wan,Ching-Lee et al.

2011

Malaysia

317

417

rs4680

DSM-Ⅳ

Wonodi,I et al.

2003

Maryland

96

79

rs4680

DSM-Ⅳ

Liou,Y.J et al.

2001

China

198

188

rs4680

DSM-Ⅳ

Herken,H et al.

2001

Turkey

129

65

rs4680

DSM-Ⅳ

3.2. Outcomes

3.2.1. rs1655599 SNP

There are 8 studies all shown the negative association(AA:OR=1.02,95% CI = 0.89-1.18, I²= 0%,P= 0.76;AG:OR=1.04, 95% CI = 0.92-1.19, I²= 57%,P= 0.51;GG:OR=1.03, 95% CI = 0.92-1.16, I²= 0%,P= 0.62) between exposure and control. In our meta analyses, we also found the same result which a sample size of 3394 as shown in supplementary Figure 2. Through a leave-one-out influence analysis, we found the result does not rely on any study.

3.2.2. rs4680 SNP

For the rs4680 SNP, we included 18 studies with a 6956 sample size. Only two genetic models have shown insignificance association: A versus G(OR=1.02,95% CI = 0.85-1.23, I²= 60%,P= 0.80) and G versus G(OR=1.00,95% CI = 0.91-1.10, I²= 10%,P= 0.97). Nevertheless, the genetic model A versus A demonstrates a significant result(OR=0.86,95% CI = 0.75-0.99, I²= 42%,P= 0.04) through sensitivity analysis which information can be acquired in Figure 3 A.The reason why we considered this may be attributed to the sample size and geographic location of the two experiments, which need to be further proven.

3.2.3. Publication bias

For rs4680 SNP, we have sufficient sympathy to analyze the publication bias which is listed in Figure 4. On the contrary, due to the insufficient studies of rs165599 SNP included in our studies we can not access the publication bias. Through the funnel graph to test the publication bias. The asymmetry of funnel graph showed it there may exist publication bias that triggers positive results.

/word/media/image2.tiff

Figure 2. Forest graph for the correlation between rs165599 SNP and schizophrenia under (A) A versus A(B) A versus G (C) G versus G genetic model.

/word/media/image3.tiff

Figure 3. Forest graph for the correlation between rs4680 SNP and schizophrenia under (A) A versus A(B) A versus G (C) G versus G genetic model for all studies.

/word/media/image4.tiff

Figure 4. funnel plot for the correlation between rs4680 SNP and schizophrenia under genetic model.

4. Conclusion

Numerous investigations have looked into the relationship between schizophrenia and COMT gene polymorphisms. Eight of the 19 papers that address this looked into the connection between the rs165599 SNP and schizophrenia. Moreover, two studies revealed a substantial positive correlation between the rs4680 SNP and schizophrenia, and 18 of them were included in the description of the SNP. The remaining ones all have negligible correlations. Overall the meta-analyses we discovered an insignificant association. However, when leaving one out of influence analysis we found the result relied on two studies which are AI-Asmary, 2014 [14]and Voisey, 2012[15]. In other words, excluding these two studies the result becomes insignificant.

Through these studies the sample size was all less than 1000, in addition to a study Zhang, Fuquan et al.2012[16] which contained 2116 people in rs165599 SNP and 1955 people in rs4680 SNP. Moreover, the case-control study as a method was used in inclusive studies. From this paper, these studies may need a bigger sample to reduce bias. Our meta-analyses which are based on these studies also showed a negative result that COMT and schizophrenia did not have a significant association.

The results of the prior investigation indicated that there was no correlation between schizophrenia and the SNPs rs4680 and rs165599. Additionally, a negative correlation was shown by our meta-analyses. However, there is insufficient data to demonstrate a negligible connection between schizophrenia and COMT. It is said that differences in linkage disequilibrium (LD) across populations may result in distinct haplotypes, rather than single-nucleotide polymorphism, being associated with schizophrenia in various populations. Also, in this meta anaylsis, we just include two SNPs rarely, and the relevant SNPs are still existing numerous numbers. Thus, in future research endeavors, all of these SNPs should be involved and pay more attention to the relationship among different SNPs. Finally, there is a significant potential for the utilization of various other methods in future research studies.


References

[1]. Chen, X., Wang, X., O’Neill, A. F., Walsh, D., & Kendler, K. S. (2004). Variants in the catechol‐o‐methyltransferase (COMT) gene are associated with schizophrenia in Irish high‐density families. Molecular Psychiatry, 9, 962–967. https://doi.org/10.1038/sj.mp. 4001519.

[2]. Collier, D. A., & Li, T. (2003). The genetics of schizophrenia: Glutamate not dopamine? European Journal of Pharmacology, 480(1– 3), 177–184. https://doi.org/10.1016/j.ejphar.2003.08.105

[3]. Karayiorgou, M., & Gogos, J. A. (1997). Dissecting the genetic complexity of schizophrenia. Molecular Psychiatry, 2, 211–223. https://doi.org/10.1038/sj.mp.4000271

[4]. Murphy, K. C., Jones, L. A., & Owen, M. J. (1999). High rates of schizophrenia in adults with velo‐cardio‐facial syndrome. Archives of General Psyc

[5]. Acar, C., Sözen, M. M., Gözükara, H., Orman, K., & Kartalci, S. (2015). Lack of association between catechol‐O‐methyltransferase and schizophrenia in a Turkish population. Turkish Journal of Biochemistry, 40, 205–209. https://doi.org/10.1515/tjb-2015-0002.

[6]. Barnett, J. H., Jones, P. B., Robbins, T. W., & Müller, U. (2007). Effects of the catechol‐O‐methyltransferase Val158Met polymorphism on executive function: A meta‐analysis of the Wisconsin Card Sort Test in schizophrenia and healthy controls. Molecular Psychiatry, 12, 502–509. https://doi.org/10.1038/sj.mp.4001973

[7]. Costas, J., Sanjuán, J., Ramos‐Ríos, R., Paz, E., Agra, S., Ivorra, J. L., … Arrojo, M. (2011). Heterozygosity at catechol‐O‐methyltransferase Val158Met and schizophrenia: New data and metaanalysis. Journal of Psychiatric Research, 45, 7–14. https://doi. org/10.1016/j.jpsychires.2010.04.021

[8]. Fan, J. B., Zhang, C. S., Gu, N. F., Li, X. W., Sun, W. W., Wang, H. Y., … He, L. (2005). Catechol‐O‐methyltransferase gene Val/Met functional polymorphism and risk of schizophrenia: A large‐scale association study plus meta‐analysis. Biological Psychiatry, 57, 139–144. https://doi.org/10.1016/j.biopsych.2004.10.018

[9]. Glatt, S. J., Faraone, S. V., & Tsuang, M. T. (2003). Association between a functional catechol O‐methyltransferase gene polymorphism and schizophrenia: Meta‐analysis of case‐control and family‐based studies. The American Journal of Psychiatry, 160, 469– 476. https://doi.org/10.1176/appi.ajp.160.3.469

[10]. Okochi, T., Ikeda, M., Kishi, T., Kawashima, K., Kinoshita, Y., Kitajima, T., … Iwata, N. (2009). Meta‐analysis of association between genetic variants in COMT and schizophrenia: An update. Schizophrenia Research, 110, 140–148. https://doi.org/10.1016/j. schres.2009.02.019

[11]. Taylor, S. (2018). Association between COMT Val158Met and psychiatric disorders: A comprehensive meta‐analysis. American Journal of Medical Genetics, Part B, Neuropsychiatric Genetics, 177, 199–210. https://doi.org/10.1002/ajmg.b.32556

[12]. Alpar, R. (2011). Uygulamalı çok değişkenli istatistiksel yöntemler, 3rd ed. Ankara, Turkey: Detay yayıncılık.

[13]. Agresti, A. (2002). Categorical data analysis, 2nd ed. Hoboken, NJ: John Wiley & Sons Inc..

[14]. Al-Asmary, S., et al. (2014). "Genetic association of catechol-O-methyltransferase val(158) met polymorphism in Saudi schizophrenia patients." Genetics and Molecular Research 13(2): 3079-3088.

[15]. Voisey, J., et al. (2012). "HapMap tag-SNP analysis confirms a role for <i>COMT</i> in schizophrenia risk and reveals a novel association." European Psychiatry 27(5): 372-376.

[16]. Zhang, F., Liu, C., Chen, Y., Wang, L., Lu, T., Yan, H., … Zhang, D. (2012). No association of catechol‐O‐methyltransferase polymorphisms with schizophrenia in the Han Chinese population.Genetic Testing and Molecular Biomarkers, 16, 1138–1141. https://doi.org/10.1089/gtmb.2012.0061


Cite this article

Li,Z. (2024). Association between Catechol-O-Methyltransferase (COMT) gene rs4680 SNP and rs165599 SNP and schizophrenia: A meta-analysis of case-control studies. Theoretical and Natural Science,64,170-176.

Data availability

The datasets used and/or analyzed during the current study will be available from the authors upon reasonable request.

Disclaimer/Publisher's Note

The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of EWA Publishing and/or the editor(s). EWA Publishing and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content.

About volume

Volume title: Proceedings of the 4th International Conference on Biological Engineering and Medical Science

ISBN:978-1-83558-731-7(Print) / 978-1-83558-732-4(Online)
Editor:Alan Wang
Conference website: https://2024.icbiomed.org/
Conference date: 25 October 2024
Series: Theoretical and Natural Science
Volume number: Vol.64
ISSN:2753-8818(Print) / 2753-8826(Online)

© 2024 by the author(s). Licensee EWA Publishing, Oxford, UK. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license. Authors who publish this series agree to the following terms:
1. Authors retain copyright and grant the series right of first publication with the work simultaneously licensed under a Creative Commons Attribution License that allows others to share the work with an acknowledgment of the work's authorship and initial publication in this series.
2. Authors are able to enter into separate, additional contractual arrangements for the non-exclusive distribution of the series's published version of the work (e.g., post it to an institutional repository or publish it in a book), with an acknowledgment of its initial publication in this series.
3. Authors are permitted and encouraged to post their work online (e.g., in institutional repositories or on their website) prior to and during the submission process, as it can lead to productive exchanges, as well as earlier and greater citation of published work (See Open access policy for details).

References

[1]. Chen, X., Wang, X., O’Neill, A. F., Walsh, D., & Kendler, K. S. (2004). Variants in the catechol‐o‐methyltransferase (COMT) gene are associated with schizophrenia in Irish high‐density families. Molecular Psychiatry, 9, 962–967. https://doi.org/10.1038/sj.mp. 4001519.

[2]. Collier, D. A., & Li, T. (2003). The genetics of schizophrenia: Glutamate not dopamine? European Journal of Pharmacology, 480(1– 3), 177–184. https://doi.org/10.1016/j.ejphar.2003.08.105

[3]. Karayiorgou, M., & Gogos, J. A. (1997). Dissecting the genetic complexity of schizophrenia. Molecular Psychiatry, 2, 211–223. https://doi.org/10.1038/sj.mp.4000271

[4]. Murphy, K. C., Jones, L. A., & Owen, M. J. (1999). High rates of schizophrenia in adults with velo‐cardio‐facial syndrome. Archives of General Psyc

[5]. Acar, C., Sözen, M. M., Gözükara, H., Orman, K., & Kartalci, S. (2015). Lack of association between catechol‐O‐methyltransferase and schizophrenia in a Turkish population. Turkish Journal of Biochemistry, 40, 205–209. https://doi.org/10.1515/tjb-2015-0002.

[6]. Barnett, J. H., Jones, P. B., Robbins, T. W., & Müller, U. (2007). Effects of the catechol‐O‐methyltransferase Val158Met polymorphism on executive function: A meta‐analysis of the Wisconsin Card Sort Test in schizophrenia and healthy controls. Molecular Psychiatry, 12, 502–509. https://doi.org/10.1038/sj.mp.4001973

[7]. Costas, J., Sanjuán, J., Ramos‐Ríos, R., Paz, E., Agra, S., Ivorra, J. L., … Arrojo, M. (2011). Heterozygosity at catechol‐O‐methyltransferase Val158Met and schizophrenia: New data and metaanalysis. Journal of Psychiatric Research, 45, 7–14. https://doi. org/10.1016/j.jpsychires.2010.04.021

[8]. Fan, J. B., Zhang, C. S., Gu, N. F., Li, X. W., Sun, W. W., Wang, H. Y., … He, L. (2005). Catechol‐O‐methyltransferase gene Val/Met functional polymorphism and risk of schizophrenia: A large‐scale association study plus meta‐analysis. Biological Psychiatry, 57, 139–144. https://doi.org/10.1016/j.biopsych.2004.10.018

[9]. Glatt, S. J., Faraone, S. V., & Tsuang, M. T. (2003). Association between a functional catechol O‐methyltransferase gene polymorphism and schizophrenia: Meta‐analysis of case‐control and family‐based studies. The American Journal of Psychiatry, 160, 469– 476. https://doi.org/10.1176/appi.ajp.160.3.469

[10]. Okochi, T., Ikeda, M., Kishi, T., Kawashima, K., Kinoshita, Y., Kitajima, T., … Iwata, N. (2009). Meta‐analysis of association between genetic variants in COMT and schizophrenia: An update. Schizophrenia Research, 110, 140–148. https://doi.org/10.1016/j. schres.2009.02.019

[11]. Taylor, S. (2018). Association between COMT Val158Met and psychiatric disorders: A comprehensive meta‐analysis. American Journal of Medical Genetics, Part B, Neuropsychiatric Genetics, 177, 199–210. https://doi.org/10.1002/ajmg.b.32556

[12]. Alpar, R. (2011). Uygulamalı çok değişkenli istatistiksel yöntemler, 3rd ed. Ankara, Turkey: Detay yayıncılık.

[13]. Agresti, A. (2002). Categorical data analysis, 2nd ed. Hoboken, NJ: John Wiley & Sons Inc..

[14]. Al-Asmary, S., et al. (2014). "Genetic association of catechol-O-methyltransferase val(158) met polymorphism in Saudi schizophrenia patients." Genetics and Molecular Research 13(2): 3079-3088.

[15]. Voisey, J., et al. (2012). "HapMap tag-SNP analysis confirms a role for <i>COMT</i> in schizophrenia risk and reveals a novel association." European Psychiatry 27(5): 372-376.

[16]. Zhang, F., Liu, C., Chen, Y., Wang, L., Lu, T., Yan, H., … Zhang, D. (2012). No association of catechol‐O‐methyltransferase polymorphisms with schizophrenia in the Han Chinese population.Genetic Testing and Molecular Biomarkers, 16, 1138–1141. https://doi.org/10.1089/gtmb.2012.0061