Pathway analysis of beneficial bacteria in suppression of plant immunity

Research Article
Open access

Pathway analysis of beneficial bacteria in suppression of plant immunity

Sihan Chen 1*
  • 1 University of Toronto    
  • *corresponding author veronica.chen@mail.utoronto.ca
Published on 20 December 2023 | https://doi.org/10.54254/2753-8818/21/20230897
TNS Vol.21
ISSN (Print): 2753-8826
ISSN (Online): 2753-8818
ISBN (Print): 978-1-83558-215-2
ISBN (Online): 978-1-83558-216-9

Abstract

Plants, much like animals, possess immune mechanisms that help protect them against harmful microorganisms and pathogens. Research studies have provided evidence that various detrimental microorganisms can target the immune system of plant roots in the soil, leading to plant diseases. At the same time, recent studies have shown that beneficial microorganisms can also suppress the plant's immune system and form a mutually beneficial relationship with the plant, promoting the colonization of beneficial bacteria and helping the plant to defend itself against other harmful microorganisms. This paper provides a summary of the concept that beneficial bacteria hinder root immunity by inhibiting various downstream reactions within the plant's immune system, based on the understanding of plant root immune mechanisms. The authors also highlight the existing gaps in research on non-invasive microbe-plant interactions and raise questions regarding the intricate interplay between immunity and symbiotic signaling.

Keywords:

beneficial bacteria, pathways, plant immunity, immune mechanisms.

Chen,S. (2023). Pathway analysis of beneficial bacteria in suppression of plant immunity. Theoretical and Natural Science,21,274-278.
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References

[1]. Torsvik, V., J. Goksoyr, and F. L. Daae. 1990. High diversity in DNA of soil bacteria. Appl. Environ. Microbiol.56:782-787.

[2]. Berendsen, R. L., Pieterse, C. M., and Bakker, P. A. 2012. The rhizosphere microbiome and plant health. Trends Plant Sci. 17:478-486

[3]. Doehlemann G, Ökmen B, Zhu W, Sharon A. Plant Pathogenic Fungi. Microbiol Spectr. 2017 Jan;5(1).

[4]. R.L. Berendsen, et al. The rhizosphere microbiome and plant health. Trends Plant Sci., 17 (2012), pp. 478-486

[5]. Zamioudis, Christos, and Corné M J Pieterse. “Modulation of host immunity by beneficial microbes.” Molecular plant-microbe interactions: MPMI vol. 25,2 (2012): 139-50.

[6]. Van Wees, Saskia C M et al. “Plant immune responses triggered by beneficial microbes.” Current opinion in plant biology vol. 11,4 (2008): 443-8.

[7]. Pazzagli, Luigia et al. “Cerato-platanins: elicitors and effectors.” Plant science: an international journal of experimental plant biology vol. 228 (2014): 79-87.

[8]. J.D. Jones, J.L. Dangl. The plant immune system. Nature, 444 (2006), pp. 323-329

[9]. Yuan M, Ngou BPM, Ding P, Xin XF. PTI-ETI crosstalk: an integrative view of plant immunity. Curr Opin Plant Biol. 2021 Aug; 62: 102030.

[10]. Nühse, Thomas S et al. “Quantitative phosphoproteomic analysis of plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses.” The Plant journal: for cell and molecular biology vol. 51,5 (2007): 931-40.

[11]. Y. Peng, R. van Wersch, Y. Zhang. Convergent and divergent signaling in PAMP-triggered immunity and effector-triggered immunity. Mol Plant Microbe Interact, 31 (2018), pp. 403-409

[12]. Zhou F, Emonet A, Dénervaud Tendon V, Marhavy P, Wu D, Lahaye T, Geldner N. Co-incidence of Damage and Microbial Patterns Controls Localized Immune Responses in Roots. Cell. 2020 Feb 6;180(3):440-453.e18.

[13]. Stringlis, Ioannis A et al. “Root transcriptional dynamics induced by beneficial rhizobacteria and microbial immune elicitors reveal signatures of adaptation to mutualists.” The Plant journal: for cell and molecular biology vol. 93,1 (2018): 166-180.

[14]. Zamioudis C Pieterse CMJ. 2012. Modulation of host immunity by beneficial microbes. Molecular Plant-Microbe Interactions25, 139–150.

[15]. Cornelis, G R, and F Van Gijsegem. “Assembly and function of type III secretory systems.” Annual review of microbiology vol. 54 (2000): 735-74.

[16]. Bartsev A.V., Deakin W.J., Boukli N.M., McAlvin C.B., Stacey G., Malnoë P., Broughton W.J., Staehelin C. Plant Physiol., 134 (2004), pp. 871-879

[17]. Zhang, Ling et al. “Functional analysis of the type 3 effector nodulation outer protein L (NopL) from Rhizobium sp. NGR234: symbiotic effects, phosphorylation, and interference with mitogen-activated protein kinase signaling.” The Journal of biological chemistry vol. 286,37 (2011): 32178-87.

[18]. Akum, Fidele N et al. “The Piriformospora indica effector PIIN_08944 promotes the mutualistic Sebacinalean symbiosis.” Frontiers in plant science vol. 6 906. 26 Oct. 2015

[19]. Verma, S., Varma, A., Rexer, K.-H., Hassel, A., Kost, G., Sarbhoy, A., et al. (1998). Piriformospora indica, gen. et sp. nov., a new root-colonizing fungus. Mycologia 90, 896–903.

[20]. Lakshmanan, Venkatachalam et al. “Microbe-associated molecular patterns-triggered root responses mediate beneficial rhizobacterial recruitment in Arabidopsis.” Plant physiology vol. 160,3 (2012): 1642-61.

[21]. Yu, Ke et al. “Rhizosphere-Associated Pseudomonas Suppress Local Root Immune Responses by Gluconic Acid-Mediated Lowering of Environmental pH.” Current biology: CB vol. 29,22 (2019): 3913-3920.e4.

[22]. Liu, Zhexian et al. “A Genome-Wide Screen Identifies Genes in Rhizosphere-Associated Pseudomonas Required to Evade Plant Defenses.” mBio vol. 9,6 e00433-18. 6 Nov. 2018


Cite this article

Chen,S. (2023). Pathway analysis of beneficial bacteria in suppression of plant immunity. Theoretical and Natural Science,21,274-278.

Data availability

The datasets used and/or analyzed during the current study will be available from the authors upon reasonable request.

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About volume

Volume title: Proceedings of the 3rd International Conference on Biological Engineering and Medical Science

ISBN:978-1-83558-215-2(Print) / 978-1-83558-216-9(Online)
Editor:Alan Wang
Conference website: https://www.icbiomed.org/
Conference date: 2 September 2023
Series: Theoretical and Natural Science
Volume number: Vol.21
ISSN:2753-8818(Print) / 2753-8826(Online)

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References

[1]. Torsvik, V., J. Goksoyr, and F. L. Daae. 1990. High diversity in DNA of soil bacteria. Appl. Environ. Microbiol.56:782-787.

[2]. Berendsen, R. L., Pieterse, C. M., and Bakker, P. A. 2012. The rhizosphere microbiome and plant health. Trends Plant Sci. 17:478-486

[3]. Doehlemann G, Ökmen B, Zhu W, Sharon A. Plant Pathogenic Fungi. Microbiol Spectr. 2017 Jan;5(1).

[4]. R.L. Berendsen, et al. The rhizosphere microbiome and plant health. Trends Plant Sci., 17 (2012), pp. 478-486

[5]. Zamioudis, Christos, and Corné M J Pieterse. “Modulation of host immunity by beneficial microbes.” Molecular plant-microbe interactions: MPMI vol. 25,2 (2012): 139-50.

[6]. Van Wees, Saskia C M et al. “Plant immune responses triggered by beneficial microbes.” Current opinion in plant biology vol. 11,4 (2008): 443-8.

[7]. Pazzagli, Luigia et al. “Cerato-platanins: elicitors and effectors.” Plant science: an international journal of experimental plant biology vol. 228 (2014): 79-87.

[8]. J.D. Jones, J.L. Dangl. The plant immune system. Nature, 444 (2006), pp. 323-329

[9]. Yuan M, Ngou BPM, Ding P, Xin XF. PTI-ETI crosstalk: an integrative view of plant immunity. Curr Opin Plant Biol. 2021 Aug; 62: 102030.

[10]. Nühse, Thomas S et al. “Quantitative phosphoproteomic analysis of plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses.” The Plant journal: for cell and molecular biology vol. 51,5 (2007): 931-40.

[11]. Y. Peng, R. van Wersch, Y. Zhang. Convergent and divergent signaling in PAMP-triggered immunity and effector-triggered immunity. Mol Plant Microbe Interact, 31 (2018), pp. 403-409

[12]. Zhou F, Emonet A, Dénervaud Tendon V, Marhavy P, Wu D, Lahaye T, Geldner N. Co-incidence of Damage and Microbial Patterns Controls Localized Immune Responses in Roots. Cell. 2020 Feb 6;180(3):440-453.e18.

[13]. Stringlis, Ioannis A et al. “Root transcriptional dynamics induced by beneficial rhizobacteria and microbial immune elicitors reveal signatures of adaptation to mutualists.” The Plant journal: for cell and molecular biology vol. 93,1 (2018): 166-180.

[14]. Zamioudis C Pieterse CMJ. 2012. Modulation of host immunity by beneficial microbes. Molecular Plant-Microbe Interactions25, 139–150.

[15]. Cornelis, G R, and F Van Gijsegem. “Assembly and function of type III secretory systems.” Annual review of microbiology vol. 54 (2000): 735-74.

[16]. Bartsev A.V., Deakin W.J., Boukli N.M., McAlvin C.B., Stacey G., Malnoë P., Broughton W.J., Staehelin C. Plant Physiol., 134 (2004), pp. 871-879

[17]. Zhang, Ling et al. “Functional analysis of the type 3 effector nodulation outer protein L (NopL) from Rhizobium sp. NGR234: symbiotic effects, phosphorylation, and interference with mitogen-activated protein kinase signaling.” The Journal of biological chemistry vol. 286,37 (2011): 32178-87.

[18]. Akum, Fidele N et al. “The Piriformospora indica effector PIIN_08944 promotes the mutualistic Sebacinalean symbiosis.” Frontiers in plant science vol. 6 906. 26 Oct. 2015

[19]. Verma, S., Varma, A., Rexer, K.-H., Hassel, A., Kost, G., Sarbhoy, A., et al. (1998). Piriformospora indica, gen. et sp. nov., a new root-colonizing fungus. Mycologia 90, 896–903.

[20]. Lakshmanan, Venkatachalam et al. “Microbe-associated molecular patterns-triggered root responses mediate beneficial rhizobacterial recruitment in Arabidopsis.” Plant physiology vol. 160,3 (2012): 1642-61.

[21]. Yu, Ke et al. “Rhizosphere-Associated Pseudomonas Suppress Local Root Immune Responses by Gluconic Acid-Mediated Lowering of Environmental pH.” Current biology: CB vol. 29,22 (2019): 3913-3920.e4.

[22]. Liu, Zhexian et al. “A Genome-Wide Screen Identifies Genes in Rhizosphere-Associated Pseudomonas Required to Evade Plant Defenses.” mBio vol. 9,6 e00433-18. 6 Nov. 2018